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Molecular Simulation Analysis

Molecular dynamics of proteins, membranes and complexes.

Updated

Overview

Simulations show how molecules move and respond over time, beyond what a static structure can tell.

Salient features

  • System building, equilibration and production runs
  • Stability, flexibility and interaction analysis
  • GPU-accelerated workflows

Analyses we offer

MD Simulations

Runs and analyses molecular dynamics: RMSD, RMSF, hydrogen bonds, energies and free-energy landscapes.

Methods: gromacs, openmm, mdanalysis, lammps.

What you receive

  • A written report with methods, parameters and interpretation
  • Processed data tables and publication-quality figures
  • Scripts and settings so every result can be reproduced

Not sure which analysis fits your data? Contact us and we will advise.

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